Reading package lists... Building dependency tree... Reading state information... NOTICE: 'alien-hunter' packaging is maintained in the 'Svn' version control system at: svn://anonscm.debian.org/debian-med/trunk/packages/alien-hunter/trunk/ Need to get 32.6 kB of source archives. Get:1 http://urika:3142/ftp.debian.org/debian/ sid/main alien-hunter 1.7-3 (dsc) [2,020 B] Get:2 http://urika:3142/ftp.debian.org/debian/ sid/main alien-hunter 1.7-3 (tar) [26.1 kB] Get:3 http://urika:3142/ftp.debian.org/debian/ sid/main alien-hunter 1.7-3 (diff) [4,504 B] gpgv: keyblock resource `/tmp/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Fri 11 Apr 2014 03:43:39 PM UTC using RSA key ID D1C646D1 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./alien-hunter_1.7-3.dsc dpkg-source: info: extracting alien-hunter in alien-hunter-1.7 dpkg-source: info: unpacking alien-hunter_1.7.orig.tar.gz dpkg-source: info: unpacking alien-hunter_1.7-3.debian.tar.xz dpkg-source: info: applying 10_fix_classpath.patch dpkg-source: info: applying 10_location_of_perl.patch Fetched 32.6 kB in 0s (135 kB/s) Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libbiojava-java libbiojava1.7-java libbytecode-java 0 upgraded, 3 newly installed, 0 to remove and 1 not upgraded. Need to get 3,296 kB of archives. After this operation, 3,908 kB of additional disk space will be used. Get:1 http://urika:3142/ftp.debian.org/debian/ sid/main libbytecode-java all 0.92.svn.20090106-1.1 [87.7 kB] Get:2 http://urika:3142/ftp.debian.org/debian/ sid/main libbiojava1.7-java all 1:1.7.1-5 [3,160 kB] Get:3 http://urika:3142/ftp.debian.org/debian/ sid/main libbiojava-java all 1:1.7.1-5 [48.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3,296 kB in 0s (5,823 kB/s) Selecting previously unselected package libbytecode-java. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82591 files and directories currently installed.) Preparing to unpack .../libbytecode-java_0.92.svn.20090106-1.1_all.deb ... Unpacking libbytecode-java (0.92.svn.20090106-1.1) ... Selecting previously unselected package libbiojava1.7-java. Preparing to unpack .../libbiojava1.7-java_1%3a1.7.1-5_all.deb ... Unpacking libbiojava1.7-java (1:1.7.1-5) ... Selecting previously unselected package libbiojava-java. Preparing to unpack .../libbiojava-java_1%3a1.7.1-5_all.deb ... Unpacking libbiojava-java (1:1.7.1-5) ... Processing triggers for man-db (2.7.2-1) ... Setting up libbytecode-java (0.92.svn.20090106-1.1) ... Setting up libbiojava1.7-java (1:1.7.1-5) ... Setting up libbiojava-java (1:1.7.1-5) ... Killed old client process Internet Systems Consortium DHCP Client 4.3.2 Copyright 2004-2015 Internet Systems Consortium. All rights reserved. For info, please visit https://www.isc.org/software/dhcp/ Listening on LPF/eth0/3a:16:30:e1:4a:b2 Sending on LPF/eth0/3a:16:30:e1:4a:b2 Sending on Socket/fallback DHCPRELEASE on eth0 to 10.0.3.1 port 67 dpkg-buildpackage: source package alien-hunter dpkg-buildpackage: source version 1.7-3 dpkg-buildpackage: source distribution unstable dpkg-buildpackage: source changed by Andreas Tille dpkg-source --before-build alien-hunter-1.7 dpkg-buildpackage: host architecture amd64 debian/rules clean dh clean dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory '/alien-hunter-1.7' rm -f *.class alien_hunter.1 make[1]: Leaving directory '/alien-hunter-1.7' dh_clean dpkg-source -b alien-hunter-1.7 dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building alien-hunter using existing ./alien-hunter_1.7.orig.tar.gz dpkg-source: info: building alien-hunter in alien-hunter_1.7-3.debian.tar.xz dpkg-source: info: building alien-hunter in alien-hunter_1.7-3.dsc debian/rules build dh build dh_testdir dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/alien-hunter-1.7' CLASSPATH=/usr/share/java/biojava.jar javac -Xlint:deprecation -Xlint:unchecked *.java ChangepointLeft.java:77: warning: [deprecation] FastaDescriptionLineParser in org.biojava.bio.seq.io has been deprecated SequenceBuilderFactory sbFact = new FastaDescriptionLineParser.Factory(SimpleSequenceBuilder.FACTORY); ^ ChangepointLeft.java:78: warning: [deprecation] FastaFormat in org.biojava.bio.seq.io has been deprecated FastaFormat fFormat = new FastaFormat(); ^ ChangepointLeft.java:78: warning: [deprecation] FastaFormat in org.biojava.bio.seq.io has been deprecated FastaFormat fFormat = new FastaFormat(); ^ ChangepointLeft.java:218: warning: [unchecked] unchecked call to put(K,V) as a member of the raw type Hashtable symbol.put(sym, new Integer(1)); ^ where K,V are type-variables: K extends Object declared in class Hashtable V extends Object declared in class Hashtable ChangepointRight.java:79: warning: [deprecation] FastaDescriptionLineParser in org.biojava.bio.seq.io has been deprecated SequenceBuilderFactory sbFact = new FastaDescriptionLineParser.Factory(SimpleSequenceBuilder.FACTORY); ^ ChangepointRight.java:80: warning: [deprecation] FastaFormat in org.biojava.bio.seq.io has been deprecated FastaFormat fFormat = new FastaFormat(); ^ ChangepointRight.java:80: warning: [deprecation] FastaFormat in org.biojava.bio.seq.io has been deprecated FastaFormat fFormat = new FastaFormat(); ^ ChangepointRight.java:220: warning: [unchecked] unchecked call to put(K,V) as a member of the raw type Hashtable symbol.put(sym, new Integer(1)); ^ where K,V are type-variables: K extends Object declared in class Hashtable V extends Object declared in class Hashtable 8 warnings make[1]: Leaving directory '/alien-hunter-1.7' dh_auto_test debian/rules binary dh binary dh_testroot dh_prep dh_auto_install dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_compress dh_fixperms dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package alien-hunter: unknown substitution variable ${shlibs:Depends} dpkg-gencontrol: warning: package alien-hunter: unused substitution variable ${perl:Depends} dh_md5sums dh_builddeb dpkg-deb: building package 'alien-hunter' in '../alien-hunter_1.7-3_all.deb'. dpkg-genchanges >../alien-hunter_1.7-3_amd64.changes dpkg-genchanges: not including original source code in upload dpkg-source --after-build alien-hunter-1.7 dpkg-buildpackage: binary and diff upload (original source NOT included)